Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6826

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6825: 15193 - K08876 SCYL1 SCY1-like protein 1, at 216078 to 219615 15193 mRNA_6826: 15194 - KOG2061 Uncharacterized MYND Zn-finger protein, at 219727 to 220528 15194 mRNA_6827: 15195 - K19029 PFKFB2 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 2, at 220795 to 223587 15195

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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218,961 + 15193 mRNA_6825 0.81 0.6
219,080 + 15193 mRNA_6825 0.85 0.2
219,283 + -1.8
219,461 - 0.1
219,509 + 1.1
219,825 + 15194 mRNA_6826 0.12 0.2
220,278 - 15194 mRNA_6826 0.69 -0.2
220,285 + 15194 mRNA_6826 0.70 1.1
220,292 - 15194 mRNA_6826 0.70 -0.4
220,426 + 15194 mRNA_6826 0.87 0.1
220,579 + 0.1
220,605 - -0.1
220,617 - 0.2
220,625 + 0.7
220,634 - -1.4
220,639 + -1.2
220,866 - -0.1
220,887 + 0.9
220,913 + -0.0
220,915 + 0.0
220,965 + 0.7
221,042 - -0.5
221,326 + 15195 mRNA_6827 0.19 -0.5
221,329 - 15195 mRNA_6827 0.19 0.1
221,417 + 15195 mRNA_6827 0.22 -0.1