Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6821

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6820: 15188 - K00931 proB glutamate 5-kinase, at 207707 to 209492 15188 mRNA_6821: 15189 - K07739 ELP3, KAT9 elongator complex protein 3, at 209677 to 212045 15189 mRNA_6822: 15190 - K20303 TRAPPC4, TRS23 trafficking protein particle complex subunit 4, at 212371 to 212952 15190 mRNA_6823: 15191 - BLAST TNFR/NGFR cysteine-rich region family protein [Rh..., at 212993 to 213573 15191

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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210,325 + 15189 mRNA_6821 0.27 1.0
210,496 + 15189 mRNA_6821 0.35 1.4
210,567 + 15189 mRNA_6821 0.38 0.7
210,597 + 15189 mRNA_6821 0.39 1.1
210,606 - 15189 mRNA_6821 0.39 0.6
210,612 + 15189 mRNA_6821 0.39 0.3
210,615 - 15189 mRNA_6821 0.40 1.2
210,843 - 15189 mRNA_6821 0.49 -0.5
211,300 + 15189 mRNA_6821 0.69 0.6
211,420 + 15189 mRNA_6821 0.74 0.7
211,490 - 15189 mRNA_6821 0.77 -1.9
211,623 + 15189 mRNA_6821 0.82 -0.6
212,365 - 1.0