Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6794

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6793: 15161 - KOG2375 Protein interacting with poly(A)-binding protein, at 144793 to 148155 15161 mRNA_6794: 15162 - K10773 NTH endonuclease III, at 148472 to 150085 15162 mRNA_6795: 15163 - KOG3548 DNA damage checkpoint protein RHP9/CRB2/53BP1, at 150190 to 154769 15163

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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147,518 - 15161 mRNA_6793 0.81 -0.6
147,817 + 15161 mRNA_6793 0.90 0.1
148,254 - 0.4
148,270 + -1.0
148,370 - 0.4
148,401 - -0.0
148,421 - -0.2
148,545 - 0.8
148,546 + -2.0
148,698 - 15162 mRNA_6794 0.14 1.5
148,700 - 15162 mRNA_6794 0.14 -0.2
149,032 + 15162 mRNA_6794 0.35 -0.0
149,257 - 15162 mRNA_6794 0.49 0.7
149,551 - 15162 mRNA_6794 0.67 0.0
149,796 - 15162 mRNA_6794 0.82 0.3
149,852 + 15162 mRNA_6794 0.86 -0.3
150,009 - -0.4
150,133 + -0.8
150,138 + -0.3
150,151 - -0.1
150,282 - -1.1
150,296 + 0.1
150,417 + -0.0
150,469 - 0.2
150,608 + -0.1
150,864 - 15163 mRNA_6795 0.15 0.4
150,895 - 15163 mRNA_6795 0.15 -0.8
151,027 - 15163 mRNA_6795 0.18 -0.3
151,051 - 15163 mRNA_6795 0.19 0.4