Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6749

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6748: 15116 - Hypothetical Protein, at 52794 to 54250 15116 mRNA_6749: 15117 - Hypothetical Protein, at 54204 to 55988 15117 mRNA_6750: 15118 - SUPERFAMILY--SSF47473, at 56227 to 57172 15118

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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53,405 + 15116 mRNA_6748 0.42 -0.1
53,511 - 15116 mRNA_6748 0.49 -0.8
53,538 - 15116 mRNA_6748 0.51 -0.5
53,654 + 15116 mRNA_6748 0.59 0.2
53,697 - 15116 mRNA_6748 0.62 1.4
53,769 - 15116 mRNA_6748 0.67 0.8
53,815 + 15116 mRNA_6748 0.70 0.4
53,974 + 15116 mRNA_6748 0.81 -1.0
54,061 - 15116 mRNA_6748 0.87 -1.1
54,153 + -1.6
54,245 + -1.3
54,249 + 0.2
54,266 - -1.1
54,269 + -0.6
54,328 - -1.2
54,398 - 15117 mRNA_6749 0.11 1.4
54,415 + 15117 mRNA_6749 0.12 -0.2
54,420 + 15117 mRNA_6749 0.12 -0.2
54,427 - 15117 mRNA_6749 0.12 0.2
54,430 + 15117 mRNA_6749 0.13 1.0
54,636 + 15117 mRNA_6749 0.24 0.9
54,873 - 15117 mRNA_6749 0.37 1.0
54,981 - 15117 mRNA_6749 0.44 -0.7
55,030 + 15117 mRNA_6749 0.46 -0.3
55,033 - 15117 mRNA_6749 0.46 -1.0
55,094 - 15117 mRNA_6749 0.50 0.2
55,135 - 15117 mRNA_6749 0.52 -0.5
55,248 - 15117 mRNA_6749 0.58 -0.1
55,265 + 15117 mRNA_6749 0.59 1.1
55,366 + 15117 mRNA_6749 0.65 0.2
55,377 + 15117 mRNA_6749 0.66 -1.0
55,411 - 15117 mRNA_6749 0.68 0.2
55,418 + 15117 mRNA_6749 0.68 -0.1
55,684 + 15117 mRNA_6749 0.83 0.4
55,702 + 15117 mRNA_6749 0.84 -0.4
55,734 - 15117 mRNA_6749 0.86 1.1
55,741 - 15117 mRNA_6749 0.86 0.1
55,797 + 15117 mRNA_6749 0.89 -0.3
55,847 + 1.2
55,883 + 1.5
55,973 - -0.5
55,979 - -2.8
55,988 - 1.1
55,988 - 0.6
55,993 + 0.3
56,081 + -0.2
56,130 - 0.1
56,133 + 0.4
56,135 - 0.5
56,257 - -1.3
56,312 + 1.4
56,430 + 15118 mRNA_6750 0.21 0.3
56,442 + 15118 mRNA_6750 0.23 -0.0
56,445 - 15118 mRNA_6750 0.23 -0.4
56,570 - 15118 mRNA_6750 0.36 -0.7
56,576 - 15118 mRNA_6750 0.37 -0.7
56,586 + 15118 mRNA_6750 0.38 -2.3
56,588 + 15118 mRNA_6750 0.38 0.6
56,589 + 15118 mRNA_6750 0.38 -0.5
56,606 + 15118 mRNA_6750 0.40 0.7
56,627 + 15118 mRNA_6750 0.42 -0.9
56,713 - 15118 mRNA_6750 0.51 -0.3