Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6608

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6607: 14975 - K14572 MDN1, REA1 midasin, at 1218299 to 1235391 14975 mRNA_6608: 14976 - HMMPfam-Yqey-like protein-PF09424,SUPERFAMILY--SSF89095, at 1235568 to 1236163 14976 mRNA_6609: 14977 - KOG1232 Proteins containing the FAD binding domain, at 1236785 to 1239365 14977

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,235,465 + -0.0
1,235,488 + 0.8
1,235,666 - 14976 mRNA_6608 0.16 0.9
1,235,771 - 14976 mRNA_6608 0.34 0.0
1,235,784 + 14976 mRNA_6608 0.36 0.6
1,235,831 + 14976 mRNA_6608 0.44 -0.1
1,236,345 - -1.9
1,236,486 + -0.8
1,236,609 - 1.4
1,236,619 + -0.8
1,236,638 + 0.1
1,236,647 + 0.1
1,236,677 - 1.7
1,236,684 - 0.0
1,236,689 + -1.6
1,236,701 - -0.3
1,236,701 + -2.1
1,236,725 + -1.6
1,236,732 + -0.8