Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6509

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6508: 14876 - KOG2688 Transcription-associated recombination protein - Thp1p, at 948399 to 950118 14876 mRNA_6509: 14877 - K12494 PSD PH and SEC7 domain-containing protein, at 950278 to 955327 14877 mRNA_6510: 14878 - K00818 E2.6.1.11, argD acetylornithine aminotransferase, at 955523 to 957319 14878

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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950,359 - -0.1
950,475 + 0.6
950,498 - 0.1
950,936 - 14877 mRNA_6509 0.13 0.2
950,936 + 14877 mRNA_6509 0.13 -0.3
950,940 - 14877 mRNA_6509 0.13 2.3
951,166 - 14877 mRNA_6509 0.18 0.2
951,813 + 14877 mRNA_6509 0.30 0.5
951,968 + 14877 mRNA_6509 0.33 -0.5
952,241 - 14877 mRNA_6509 0.39 -1.4
953,108 - 14877 mRNA_6509 0.56 -0.6
953,551 - 14877 mRNA_6509 0.65 0.3
953,675 + 14877 mRNA_6509 0.67 0.3
954,170 - 14877 mRNA_6509 0.77 0.4
954,213 + 14877 mRNA_6509 0.78 -0.5
954,521 + 14877 mRNA_6509 0.84 -1.1
954,607 - 14877 mRNA_6509 0.86 -0.4
954,885 + -0.2
955,203 + 1.8
955,323 - 0.1
955,325 + -0.2
955,358 - 0.0
955,636 - 0.4
955,637 + -0.2
955,680 - -1.0
955,973 + 14878 mRNA_6510 0.25 0.2
955,987 - 14878 mRNA_6510 0.26 0.3