Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6446

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810637 to 814255 14813 mRNA_6446: 14814 - Hypothetical Protein, at 814402 to 816229 14814 mRNA_6447: 14815 - Hypothetical Protein, at 816253 to 817256 14815

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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813,631 + 14813 mRNA_6445 0.83 0.3
813,643 + 14813 mRNA_6445 0.83 1.0
813,655 - 14813 mRNA_6445 0.83 -0.1
813,664 - 14813 mRNA_6445 0.84 -1.3
813,810 - 14813 mRNA_6445 0.88 -0.8
813,890 + 14813 mRNA_6445 0.90 -0.2
813,922 + 0.5
813,929 + -0.3
813,989 - 0.4
814,010 + -0.5
814,041 - 0.1
814,055 - -0.7
814,072 + -0.6
814,076 - 0.0
814,196 - -1.2
814,209 + -0.5
814,211 + -0.1
814,222 + 1.1
814,317 - -0.3
814,335 + 0.8
814,357 + -0.6
814,364 - -0.6
814,487 - 0.2
814,500 - -1.2
814,717 - 14814 mRNA_6446 0.17 -0.1
814,718 + 14814 mRNA_6446 0.17 -0.3
814,742 - 14814 mRNA_6446 0.19 0.2
814,796 + 14814 mRNA_6446 0.22 0.1
814,881 - 14814 mRNA_6446 0.26 0.7
814,915 - 14814 mRNA_6446 0.28 0.2
814,920 + 14814 mRNA_6446 0.28 -0.3
814,977 - 14814 mRNA_6446 0.31 1.5
815,172 - 14814 mRNA_6446 0.42 -0.2
815,247 + 14814 mRNA_6446 0.46 0.4
815,420 - 14814 mRNA_6446 0.56 -1.5
815,438 - 14814 mRNA_6446 0.57 -1.3
815,531 + 14814 mRNA_6446 0.62 -0.3
815,546 - 14814 mRNA_6446 0.63 -1.0
815,566 + 14814 mRNA_6446 0.64 -0.3
815,621 + 14814 mRNA_6446 0.67 0.5
815,670 + 14814 mRNA_6446 0.69 0.3
815,680 + 14814 mRNA_6446 0.70 0.2
815,797 + 14814 mRNA_6446 0.76 -1.4
815,823 + 14814 mRNA_6446 0.78 0.8
815,826 - 14814 mRNA_6446 0.78 -0.2
815,925 - 14814 mRNA_6446 0.83 1.1
815,928 - 14814 mRNA_6446 0.83 -1.1
815,929 + 14814 mRNA_6446 0.84 0.4
815,930 - 14814 mRNA_6446 0.84 -0.4
815,932 - 14814 mRNA_6446 0.84 -1.4
816,063 + -0.3
816,069 - -0.3
816,098 + -0.2
816,200 - 0.0
816,580 + 14815 mRNA_6447 0.33 -1.1
816,639 + 14815 mRNA_6447 0.38 0.5
816,944 + 14815 mRNA_6447 0.69 0.3
817,012 + 14815 mRNA_6447 0.76 -0.8
817,058 + 14815 mRNA_6447 0.80 -1.5
817,060 - 14815 mRNA_6447 0.80 -0.2