Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6445

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6444: 14812 - Hypothetical Protein, at 808406 to 809831 14812 mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810637 to 814255 14813 mRNA_6446: 14814 - Hypothetical Protein, at 814402 to 816229 14814

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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809,998 - -3.2
810,031 - -0.0
810,202 + -0.6
810,226 - -0.2
810,488 - 0.2
810,541 - -1.0
810,889 - 0.2
810,934 + -0.7
810,989 - -1.4
811,032 - 14813 mRNA_6445 0.11 -0.3
811,040 + 14813 mRNA_6445 0.11 -1.4
811,074 - 14813 mRNA_6445 0.12 -0.0
811,090 + 14813 mRNA_6445 0.13 -1.5
811,238 + 14813 mRNA_6445 0.17 0.0
811,239 - 14813 mRNA_6445 0.17 0.1
811,388 + 14813 mRNA_6445 0.21 0.4
811,525 + 14813 mRNA_6445 0.25 -1.1
811,609 + 14813 mRNA_6445 0.27 -0.3
811,722 - 14813 mRNA_6445 0.30 -0.1
811,878 + 14813 mRNA_6445 0.34 0.3
811,921 - 14813 mRNA_6445 0.35 0.3
812,121 - 14813 mRNA_6445 0.41 -0.1
812,124 - 14813 mRNA_6445 0.41 0.7
812,133 - 14813 mRNA_6445 0.41 0.7
812,142 + 14813 mRNA_6445 0.42 0.3
812,142 + 14813 mRNA_6445 0.42 0.7
812,563 - 14813 mRNA_6445 0.53 -0.6
812,625 - 14813 mRNA_6445 0.55 0.4
812,704 - 14813 mRNA_6445 0.57 1.0
812,740 + 14813 mRNA_6445 0.58 0.2
812,869 + 14813 mRNA_6445 0.62 -0.2
813,001 - 14813 mRNA_6445 0.65 -0.4
813,327 - 14813 mRNA_6445 0.74 0.4
813,631 + 14813 mRNA_6445 0.83 0.3
813,643 + 14813 mRNA_6445 0.83 1.0
813,655 - 14813 mRNA_6445 0.83 -0.1
813,664 - 14813 mRNA_6445 0.84 -1.3
813,810 - 14813 mRNA_6445 0.88 -0.8
813,890 + 14813 mRNA_6445 0.90 -0.2
813,922 + 0.5
813,929 + -0.3
813,989 - 0.4
814,010 + -0.5
814,041 - 0.1
814,055 - -0.7
814,072 + -0.6
814,076 - 0.0
814,196 - -1.2
814,209 + -0.5
814,211 + -0.1
814,222 + 1.1
814,317 - -0.3
814,335 + 0.8
814,357 + -0.6
814,364 - -0.6
814,487 - 0.2
814,500 - -1.2
814,717 - 14814 mRNA_6446 0.17 -0.1
814,718 + 14814 mRNA_6446 0.17 -0.3
814,742 - 14814 mRNA_6446 0.19 0.2
814,796 + 14814 mRNA_6446 0.22 0.1
814,881 - 14814 mRNA_6446 0.26 0.7
814,915 - 14814 mRNA_6446 0.28 0.2
814,920 + 14814 mRNA_6446 0.28 -0.3
814,977 - 14814 mRNA_6446 0.31 1.5
815,172 - 14814 mRNA_6446 0.42 -0.2
815,247 + 14814 mRNA_6446 0.46 0.4