Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6432

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6431: 14799 - Hypothetical Protein, at 786526 to 787659 14799 mRNA_6432: 14800 - K18203 LCMT1 [phosphatase 2A protein]-leucine-carboxy methyltransferase, at 788062 to 789443 14800 mRNA_6433: 14801 - K12180 COPS7, CSN7 COP9 signalosome complex subunit 7, at 789986 to 791469 14801

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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787,076 - 14799 mRNA_6431 0.49 -1.5
787,191 - 14799 mRNA_6431 0.59 0.0
787,205 - 14799 mRNA_6431 0.60 0.4
787,294 - 14799 mRNA_6431 0.68 -0.8
787,494 + 14799 mRNA_6431 0.85 1.0
787,554 + 0.1
787,884 - -1.0
787,897 - -0.5
788,026 - -0.7
788,246 - 14800 mRNA_6432 0.13 -0.5
788,330 - 14800 mRNA_6432 0.19 -0.4
788,465 + 14800 mRNA_6432 0.29 -0.3
788,888 + 14800 mRNA_6432 0.60 -0.3
788,902 + 14800 mRNA_6432 0.61 -0.2
788,933 - 14800 mRNA_6432 0.63 -0.6
789,030 + 14800 mRNA_6432 0.70 -0.2
789,338 - 0.2
789,352 + -1.3
789,481 - -0.3
789,483 - -0.6
789,528 + -0.8
789,596 - -0.2
789,761 + -0.1
789,766 - -0.6
789,766 - -1.7
789,766 - 0.8
789,769 + -1.3
789,773 + -0.1
789,774 - 0.1
789,786 + 0.0
789,786 + -0.3
789,897 - -1.2
789,914 - 1.9
789,915 + 1.1
789,935 + -0.3
789,942 + 0.8
789,943 + 2.2
789,954 + -1.2
790,050 - -1.8
790,087 + 0.5
790,246 + 14801 mRNA_6433 0.18 0.0