Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6419

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6418: 14786 - K02127 ATPeF0B, ATP5F1, ATP4 F-type H+-transporting ATPase subunit b, at 760341 to 761286 14786 mRNA_6419: 14787 - KOG0744 AAA+-type ATPase, at 761703 to 763959 14787 mRNA_6420: 14788 - K14263 BNA7 kynurenine formamidase, at 764043 to 765055 14788

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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761,322 - -1.1
761,531 + -0.3
761,633 + 0.2
761,662 - 0.7
761,775 + 1.7
761,814 - -0.0
762,180 - 14787 mRNA_6419 0.21 0.1
762,210 + 14787 mRNA_6419 0.22 -0.0
762,269 + 14787 mRNA_6419 0.25 0.0
762,341 - 14787 mRNA_6419 0.28 -0.7
762,637 - 14787 mRNA_6419 0.41 -1.8
763,378 + 14787 mRNA_6419 0.74 0.1
763,897 + 1.5
763,981 + 0.7
764,519 + 14788 mRNA_6420 0.47 -0.2
764,569 + 14788 mRNA_6420 0.52 -1.0
764,829 - 14788 mRNA_6420 0.78 -0.7