Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6408

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6407: 14775 - HMMPfam-Protein of unknown function (DUF952)-PF06108,SUPERFAMILY--SSF56399, at 739479 to 740196 14775 mRNA_6408: 14776 - K19308 BMT6 25S rRNA (uracil2843-N3)-methyltransferase, at 740308 to 741629 14776 mRNA_6409: 14777 - KOG2806 Chitinase, at 741880 to 743909 14777

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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739,509 + -1.6
739,858 - 14775 mRNA_6407 0.53 -0.3
739,922 + 14775 mRNA_6407 0.62 -0.0
740,097 + 14775 mRNA_6407 0.86 -0.3
740,109 + 14775 mRNA_6407 0.88 -0.5
740,118 + 14775 mRNA_6407 0.89 0.6
740,245 + -0.7
740,256 + -1.1
740,536 + 14776 mRNA_6408 0.17 -0.5
740,658 + 14776 mRNA_6408 0.26 1.8
740,682 + 14776 mRNA_6408 0.28 0.5
740,829 - 14776 mRNA_6408 0.39 -2.0
741,116 + 14776 mRNA_6408 0.61 -1.4
741,148 + 14776 mRNA_6408 0.64 -0.3
741,275 - 14776 mRNA_6408 0.73 -0.9
741,645 + -0.4
741,725 - 0.5
741,746 - -0.1
741,792 - 1.2
742,366 + 14777 mRNA_6409 0.24 -0.2
742,415 + 14777 mRNA_6409 0.26 1.4
742,605 - 14777 mRNA_6409 0.36 1.1