Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6334

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6333: 14701 - K08852 ERN1 serine/threonine-protein kinase/endoribonuclease IRE1, at 569100 to 573400 14701 mRNA_6334: 14702 - Hypothetical Protein, at 573693 to 575624 14702 mRNA_6335: 14703 - BLAST chloride channel protein 3 [Pseudozyma hubeiensis..., at 576114 to 577521 14703

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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573,380 - 0.1
574,114 + 14702 mRNA_6334 0.22 2.2
574,387 + 14702 mRNA_6334 0.36 0.3
574,681 - 14702 mRNA_6334 0.51 0.6
575,021 + 14702 mRNA_6334 0.69 -1.0
575,144 - 14702 mRNA_6334 0.75 0.0
575,255 + 14702 mRNA_6334 0.81 -1.9
575,390 + 14702 mRNA_6334 0.88 0.1
575,565 - -0.2
575,679 - 0.1
575,708 - 0.8
575,858 + -1.0
575,991 - -0.9
575,997 - -1.6
576,262 - 14703 mRNA_6335 0.11 -0.1
576,595 - 14703 mRNA_6335 0.34 0.9