Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6267

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6266: 14634 - Hypothetical Protein, at 396556 to 399256 14634 mRNA_6267: 14635 - KOG1721 FOG Zn-finger, at 399476 to 403885 14635 mRNA_6268: 14636 - HMMPfam-Survival motor neuron protein (SMN)-PF06003, at 404053 to 405342 14636

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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398,544 + 14634 mRNA_6266 0.74 0.8
399,156 - -0.0
399,162 - -1.1
399,165 - 0.9
399,179 - 0.4
399,185 + -0.3
399,188 - -0.1
399,300 - 0.1
399,305 - 0.6
399,305 - -1.2
399,306 - -0.8
399,315 + 0.3
399,316 - 1.8
399,316 - -1.4
399,318 - 0.3
399,324 - -0.8
399,325 + -0.7
399,338 + 0.0
399,344 - -0.5
399,349 - 0.5
399,489 + -0.5
399,523 + 0.5
399,654 + 0.7
399,796 - -0.4
399,915 - 0.2
400,496 - 14635 mRNA_6267 0.23 -0.7
401,055 + 14635 mRNA_6267 0.36 0.0
401,263 - 14635 mRNA_6267 0.41 -0.6
401,636 - 14635 mRNA_6267 0.49 0.6
402,015 + 14635 mRNA_6267 0.58 0.3
402,045 + 14635 mRNA_6267 0.58 0.2
402,328 + 14635 mRNA_6267 0.65 -0.6
402,496 - 14635 mRNA_6267 0.68 -0.7
402,816 + 14635 mRNA_6267 0.76 0.2
402,901 - 14635 mRNA_6267 0.78 0.5
403,180 - 14635 mRNA_6267 0.84 -1.4
403,184 + 14635 mRNA_6267 0.84 -2.2
403,341 + 14635 mRNA_6267 0.88 -0.6
403,477 + -1.2
403,491 + -1.5
403,496 - -0.4
403,517 - 0.0
403,521 - 0.1
403,641 - -1.7
403,663 + -2.7
403,667 - -2.7
403,667 - 1.1
403,673 + -0.0
403,683 + -1.8
403,684 + 0.7
403,699 + 0.4
403,945 - -0.8
403,952 - -0.3
403,967 + -1.1
403,973 + -0.3
403,973 + -0.8
403,982 - -0.4
403,985 - -0.5
403,986 + 0.1
403,986 + -0.7
403,989 + -0.7
403,994 - -0.3
403,995 + -1.0
403,998 + 0.6
403,999 - -0.4
404,000 + -0.1
404,005 + -1.8
404,007 + -1.5
404,013 + 0.3
404,021 + -0.6
404,126 - -0.6
404,133 - -0.0
404,139 - 0.4
404,143 + -1.2
404,159 + 0.6
404,164 - -0.4
404,164 - 0.3
404,288 - 14636 mRNA_6268 0.18 0.7
404,299 - 14636 mRNA_6268 0.19 0.9