Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6180

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6179: 14547 - KOG2101 Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s), at 187281 to 188756 14547 mRNA_6180: 14548 - KOG0218 Mismatch repair MSH3, at 188869 to 192529 14548 mRNA_6181: 14549 - K13126 PABPC polyadenylate-binding protein, at 192986 to 195356 14549

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
188,291 + 14547 mRNA_6179 0.68 -0.4
188,455 + 14547 mRNA_6179 0.80 -1.4
189,007 + -0.1
189,126 + 2.4
189,406 - 14548 mRNA_6180 0.15 0.6
189,478 - 14548 mRNA_6180 0.17 1.2
189,585 + 14548 mRNA_6180 0.20 0.8
190,042 + 14548 mRNA_6180 0.32 1.3
190,631 + 14548 mRNA_6180 0.48 0.5
190,787 + 14548 mRNA_6180 0.52 -0.1
190,798 + 14548 mRNA_6180 0.53 -0.2
190,905 - 14548 mRNA_6180 0.56 -0.2
191,116 - 14548 mRNA_6180 0.61 1.6
191,492 - 14548 mRNA_6180 0.72 -1.1
191,634 - 14548 mRNA_6180 0.76 0.1
191,676 - 14548 mRNA_6180 0.77 0.6
191,696 + 14548 mRNA_6180 0.77 -1.9
192,222 + 0.2
192,240 + 1.3
192,371 - 0.7
192,516 - -0.3
192,683 + -0.0
192,705 + -0.8
192,706 - 0.0
192,707 + 0.0
193,068 - 2.1