Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6141

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6141: 14509 - HMMPfam-GGL domain-PF00631,SUPERFAMILY--SSF48670, at 106663 to 106926 14509 mRNA_6142: 14510 - Hypothetical Protein, at 107739 to 108173 14510

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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105,769 - 0.1
105,791 - -0.4
105,801 - -0.2
105,818 + -0.2
105,823 + 1.7
105,825 - 0.5
105,829 - -0.7
105,830 + -0.7
105,839 - 0.6
105,841 - -1.0
105,842 + 1.2
105,850 - -0.1
105,851 + -0.6
105,851 + -1.5
105,858 + -0.1
105,867 - -0.2
105,871 - 0.2
105,882 - 0.0
105,996 + -0.0
106,003 + -0.0
106,080 - -0.9
106,316 - -0.6
106,576 + -1.9
106,722 - 14509 mRNA_6141 0.22 -0.5
106,999 - -0.3
107,009 + 0.0
107,019 + 0.6
107,025 - -0.7
107,029 - 0.8
107,034 - 0.2
107,155 + -0.7
107,166 + -1.8
107,170 + -0.7
107,171 + 2.1
107,175 - -0.8
107,296 - 0.7
107,308 + -0.5
107,310 + 1.8
107,310 - 0.2
107,320 - -0.5
107,332 - 0.7
107,333 - -0.2
107,346 - 1.2
107,359 - 0.7
107,363 + 0.2
107,371 - 0.1
107,372 - -0.2
107,375 - 0.0
107,376 + 0.5
107,390 + -0.5
107,395 + 0.1
107,488 - -0.2
107,507 + -0.1
107,523 - 0.0
107,535 - -0.0
107,535 - 0.1
107,536 + 1.0
107,542 + -1.5
107,559 + -0.2
107,574 - -0.1
107,674 - 1.0
107,691 - -0.4
107,819 - 14510 mRNA_6142 0.18 -0.7