Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6130

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6129: 14497 - Hypothetical Protein, at 71681 to 73838 14497 mRNA_6130: 14498 - K11786 STH1_SNF2 ATP-dependent helicase STH1/SNF2, at 73930 to 78529 14498 mRNA_6131: 14499 - K01057 PGLS, pgl, devB 6-phosphogluconolactonase, at 79041 to 80063 14499

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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73,080 - 14497 mRNA_6129 0.65 -0.5
73,152 - 14497 mRNA_6129 0.68 -0.9
73,165 - 14497 mRNA_6129 0.69 -0.9
73,449 + 14497 mRNA_6129 0.82 0.1
73,588 - 14497 mRNA_6129 0.88 1.0
73,730 - -0.7
73,752 + 0.3
73,882 + -0.6
73,902 + -0.4
73,902 - -1.7
73,907 - -0.4
73,911 + -2.0
73,915 + -1.1
73,922 + 0.3
73,922 - 0.5
77,163 + 14498 mRNA_6130 0.70 0.8
77,481 - 14498 mRNA_6130 0.77 0.2
77,736 + 14498 mRNA_6130 0.83 0.2
77,770 - 14498 mRNA_6130 0.83 -1.1
78,036 + 14498 mRNA_6130 0.89 -0.1
78,487 - 0.3
78,488 + 0.7
78,489 + -0.1
78,501 + -0.0
78,523 + 0.1
78,526 + -0.9
78,559 + -0.0
78,650 - 0.1
78,654 + -0.3
78,660 - -0.3
78,675 + -0.5
78,764 - -0.2
78,766 - -0.7
78,768 - 0.2
78,771 - -2.0
78,782 - 0.1
78,785 - -0.1
78,787 - 1.2
78,804 - -0.1
78,905 + -0.2
78,938 + -1.3
78,977 - -1.4