Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6058

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6056: 14424 - K13996 EPS1 protein disulfide-isomerase, at 1537539 to 1540392 14424 mRNA_6057: 14425 - Hypothetical Protein, at 1540380 to 1540856 14425 mRNA_6058: 14426 - SUPERFAMILY--SSF52047, at 1541089 to 1542626 14426 mRNA_6059: 14427 - SUPERFAMILY--SSF52047, at 1543443 to 1544992 14427

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,540,143 - -2.1
1,540,186 - 0.1
1,540,191 + 0.5
1,540,301 - 2.2
1,540,353 - -0.5
1,540,481 - 14425 mRNA_6057 0.21 -0.9
1,540,610 + 14425 mRNA_6057 0.48 -1.2
1,540,617 + 14425 mRNA_6057 0.50 -0.5
1,540,618 + 14425 mRNA_6057 0.50 0.3
1,540,639 + 14425 mRNA_6057 0.54 0.5
1,540,765 - 14425 mRNA_6057 0.81 -0.6
1,540,963 - -0.1
1,541,105 + -1.1
1,541,113 - -0.0
1,541,190 + -0.6
1,541,371 - 14426 mRNA_6058 0.18 0.5
1,541,502 - 14426 mRNA_6058 0.27 -0.9
1,541,519 + 14426 mRNA_6058 0.28 2.0
1,541,552 + 14426 mRNA_6058 0.30 -1.2
1,541,620 + 14426 mRNA_6058 0.35 -0.6
1,541,648 - 14426 mRNA_6058 0.36 -1.0
1,541,649 + 14426 mRNA_6058 0.36 -0.8
1,541,658 + 14426 mRNA_6058 0.37 -1.4
1,541,756 - 14426 mRNA_6058 0.43 0.4
1,541,760 + 14426 mRNA_6058 0.44 0.8
1,541,920 - 14426 mRNA_6058 0.54 -1.3
1,542,038 + 14426 mRNA_6058 0.62 0.7
1,542,194 - 14426 mRNA_6058 0.72 -0.9
1,542,278 + 14426 mRNA_6058 0.77 -0.5
1,542,319 - 14426 mRNA_6058 0.80 -1.5
1,542,519 + 0.2
1,542,525 - -0.2
1,542,667 - -0.0
1,542,811 - 0.9
1,542,812 + 0.5
1,542,950 + -2.2
1,542,985 + -0.9
1,542,991 + -1.9
1,543,117 - -1.0
1,543,134 + 0.8
1,543,229 + -0.6
1,543,230 - 0.0
1,543,291 + 1.0
1,543,478 + -0.1
1,543,569 - 0.0