Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6038

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6037: 14405 - SUPERFAMILY--SSF52047, at 1495586 to 1496740 14405 mRNA_6038: 14406 - Hypothetical Protein, at 1497291 to 1498658 14406 mRNA_6039: 14407 - Interpro F-box-like, at 1498979 to 1500418 14407

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,496,322 - 14405 mRNA_6037 0.64 -1.0
1,496,433 - 14405 mRNA_6037 0.73 0.4
1,496,533 + 14405 mRNA_6037 0.82 -0.9
1,496,594 - 14405 mRNA_6037 0.87 -0.9
1,496,667 - -0.3
1,497,179 + 0.3
1,497,283 - 0.5
1,497,314 + -1.2
1,497,331 - 1.4
1,497,457 - 14406 mRNA_6038 0.12 1.4
1,497,460 - 14406 mRNA_6038 0.12 0.6
1,497,703 - 14406 mRNA_6038 0.30 1.2
1,497,908 - 14406 mRNA_6038 0.45 -0.1
1,498,018 + 14406 mRNA_6038 0.53 2.3
1,498,023 - 14406 mRNA_6038 0.54 1.1
1,498,068 + 14406 mRNA_6038 0.57 -0.5
1,498,163 + 14406 mRNA_6038 0.64 -1.1
1,498,190 + 14406 mRNA_6038 0.66 -1.0
1,498,194 - 14406 mRNA_6038 0.66 0.0
1,498,304 - 14406 mRNA_6038 0.74 -0.3
1,498,561 + 0.2
1,498,569 - -0.4
1,498,579 - -0.2
1,498,614 - 0.7
1,498,661 + 0.6
1,498,757 - 0.0
1,498,782 + 0.9
1,498,785 - 1.6
1,498,881 + -0.1
1,498,962 + 0.5
1,499,007 - 0.1
1,499,200 + 14407 mRNA_6039 0.15 -0.4
1,499,211 - 14407 mRNA_6039 0.16 0.4
1,499,219 - 14407 mRNA_6039 0.17 -0.0
1,499,240 + 14407 mRNA_6039 0.18 0.8
1,499,325 + 14407 mRNA_6039 0.24 -1.5
1,499,376 - 14407 mRNA_6039 0.28 1.0
1,499,424 + 14407 mRNA_6039 0.31 -1.0
1,499,478 - 14407 mRNA_6039 0.35 -0.5
1,499,514 + 14407 mRNA_6039 0.37 -0.9
1,499,573 - 14407 mRNA_6039 0.41 -1.1