Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6030

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6029: 14397 - K01056 PTH1, pth, spoVC peptidyl-tRNA hydrolase, PTH1 family, at 1481515 to 1482449 14397 mRNA_6030: 14398 - KOG4036 Uncharacterized conserved protein, at 1482702 to 1483838 14398 mRNA_6031: 14399 - KOG2890 Predicted membrane protein, at 1484173 to 1485684 14399

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,482,482 - 1.7
1,482,569 - 0.4
1,482,608 - 0.1
1,482,612 - -0.0
1,482,622 - 0.5
1,482,878 - 14398 mRNA_6030 0.15 0.2
1,482,946 + 14398 mRNA_6030 0.21 -1.1
1,483,016 - 14398 mRNA_6030 0.28 0.1
1,483,082 - 14398 mRNA_6030 0.33 0.2
1,483,212 - 14398 mRNA_6030 0.45 -0.8
1,483,340 + 14398 mRNA_6030 0.56 0.5
1,483,765 - -0.9
1,484,063 + -0.2
1,484,064 - -0.9
1,484,076 - 0.1
1,484,079 - -1.2
1,484,087 + -0.5
1,484,092 - 0.1
1,484,093 - 0.3
1,484,372 + 14399 mRNA_6031 0.13 -0.7
1,484,394 + 14399 mRNA_6031 0.15 1.3
1,484,488 - 14399 mRNA_6031 0.21 -0.7
1,484,732 - 14399 mRNA_6031 0.37 -1.1
1,484,812 + 14399 mRNA_6031 0.42 0.1
1,484,814 - 14399 mRNA_6031 0.42 1.3