Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5964

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5963: 14331 - Interpro F-box-like, at 1342059 to 1343538 14331 mRNA_5964: 14332 - Hypothetical Protein, at 1343767 to 1344081 14332 mRNA_5965: 14333 - Hypothetical Protein, at 1344159 to 1346250 14333

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,342,813 + 14331 mRNA_5963 0.51 -0.1
1,342,842 + 14331 mRNA_5963 0.53 -1.8
1,342,872 + 14331 mRNA_5963 0.55 -0.4
1,342,956 - 14331 mRNA_5963 0.61 0.3
1,343,008 - 14331 mRNA_5963 0.64 -0.1
1,343,018 + 14331 mRNA_5963 0.65 -1.1
1,343,031 - 14331 mRNA_5963 0.66 0.1
1,343,106 - 14331 mRNA_5963 0.71 -1.1
1,343,111 + 14331 mRNA_5963 0.71 -0.5
1,343,126 - 14331 mRNA_5963 0.72 0.5
1,343,126 - 14331 mRNA_5963 0.72 -0.7
1,343,135 + 14331 mRNA_5963 0.73 -0.3
1,343,139 + 14331 mRNA_5963 0.73 0.6
1,343,154 + 14331 mRNA_5963 0.74 -0.1
1,343,174 - 14331 mRNA_5963 0.75 0.5
1,343,186 - 14331 mRNA_5963 0.76 0.3
1,343,194 - 14331 mRNA_5963 0.77 -0.9
1,343,302 - 14331 mRNA_5963 0.84 0.6
1,343,327 - 14331 mRNA_5963 0.86 0.8
1,343,409 + -0.4
1,343,438 - 0.4
1,343,449 - -0.3
1,343,453 + -0.5
1,343,588 + -0.7
1,343,644 - -0.2
1,343,763 + 0.0
1,343,778 - -0.1
1,343,839 + 14332 mRNA_5964 0.23 -0.5
1,343,876 - 14332 mRNA_5964 0.35 1.0
1,343,890 - 14332 mRNA_5964 0.39 -0.8
1,343,900 + 14332 mRNA_5964 0.42 1.1
1,343,902 + 14332 mRNA_5964 0.43 -1.5
1,343,996 + 14332 mRNA_5964 0.73 0.1
1,344,009 - 14332 mRNA_5964 0.77 -0.3
1,344,024 + 14332 mRNA_5964 0.82 1.0
1,344,031 - 14332 mRNA_5964 0.84 0.8
1,344,043 + 14332 mRNA_5964 0.88 0.2
1,344,078 - -0.1
1,344,094 - -0.6
1,344,164 - 0.3
1,344,205 + 0.2
1,344,328 + -0.7
1,344,377 + 14333 mRNA_5965 0.10 0.4
1,344,588 - 14333 mRNA_5965 0.21 0.1
1,344,917 - 14333 mRNA_5965 0.36 -0.3
1,345,016 - 14333 mRNA_5965 0.41 -1.1
1,345,023 - 14333 mRNA_5965 0.41 -0.6
1,345,026 - 14333 mRNA_5965 0.41 -0.5
1,345,031 + 14333 mRNA_5965 0.42 -0.3
1,345,032 + 14333 mRNA_5965 0.42 0.6