Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5840

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5839: 14207 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 1057986 to 1059874 14207 mRNA_5840: 14208 - Hypothetical Protein, at 1060161 to 1062503 14208 mRNA_5841: 14209 - KOG1577 Aldo/keto reductase family proteins, at 1062734 to 1064125 14209

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,059,267 + 14207 mRNA_5839 0.68 0.2
1,059,657 + 14207 mRNA_5839 0.88 -0.7
1,059,693 + -0.6
1,059,703 + 0.9
1,059,704 - 0.3
1,059,715 + 1.4
1,059,856 - -0.8
1,059,861 + -2.0
1,059,998 + 0.3
1,060,146 + -0.2
1,060,596 - 14208 mRNA_5840 0.19 -0.4
1,060,740 - 14208 mRNA_5840 0.25 -0.0
1,060,749 + 14208 mRNA_5840 0.25 1.5
1,060,891 + 14208 mRNA_5840 0.31 -1.6
1,061,154 - 14208 mRNA_5840 0.42 -0.6
1,061,174 + 14208 mRNA_5840 0.43 0.6
1,061,491 - 14208 mRNA_5840 0.57 -1.6
1,061,788 + 14208 mRNA_5840 0.69 1.0
1,062,494 + 1.3
1,062,617 - 0.0
1,062,626 + 0.4
1,062,654 - -1.6
1,062,699 - 0.4
1,062,933 - 14209 mRNA_5841 0.14 -1.3
1,062,935 - 14209 mRNA_5841 0.14 -0.5
1,062,952 - 14209 mRNA_5841 0.16 -0.8
1,063,094 - 14209 mRNA_5841 0.26 -0.3
1,063,097 + 14209 mRNA_5841 0.26 2.5
1,063,099 + 14209 mRNA_5841 0.26 1.2
1,063,105 + 14209 mRNA_5841 0.27 -0.4
1,063,107 + 14209 mRNA_5841 0.27 0.1
1,063,132 - 14209 mRNA_5841 0.29 -0.2
1,063,249 + 14209 mRNA_5841 0.37 -1.0
1,063,256 - 14209 mRNA_5841 0.38 -0.9
1,063,274 - 14209 mRNA_5841 0.39 -1.1