Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5831

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5830: 14198 - HMMPfam-Mitochondrial protein Pet127-PF08634, at 1040175 to 1043789 14198 mRNA_5831: 14199 - KOG1198 Zinc-binding oxidoreductase, at 1043926 to 1045308 14199 mRNA_5832: 14200 - K02863 RP-L1, MRPL1, rplA large subunit ribosomal protein L1, at 1045581 to 1047659 14200

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,043,893 + 0.3
1,044,051 + 0.2
1,044,087 - 14199 mRNA_5831 0.12 -1.3
1,044,597 - 14199 mRNA_5831 0.49 0.1
1,044,969 - 14199 mRNA_5831 0.75 -0.2
1,045,059 - 14199 mRNA_5831 0.82 0.2
1,045,060 + 14199 mRNA_5831 0.82 1.7
1,045,070 + 14199 mRNA_5831 0.83 1.3
1,045,241 + -2.0
1,045,360 - 0.6
1,045,376 + -1.4
1,045,388 + 0.0
1,045,396 - 0.3
1,046,243 + 14200 mRNA_5832 0.32 -0.9