Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5815

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5814: 14182 - K06669 SMC3, CSPG6 structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6), at 1000707 to 1005630 14182 mRNA_5815: 14183 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 1006011 to 1008191 14183

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,005,645 - -0.3
1,005,690 - 0.7
1,005,722 - 0.4
1,005,724 - -0.3
1,005,760 + -0.3
1,005,768 - 0.6
1,005,797 - -1.6
1,005,798 - 0.3
1,005,800 + -0.0
1,005,814 + -0.0
1,005,960 + -1.6
1,005,964 + -1.4
1,005,966 + -0.6
1,006,306 - 14183 mRNA_5815 0.14 -0.1
1,006,547 + 14183 mRNA_5815 0.25 0.3
1,007,477 + 14183 mRNA_5815 0.67 0.2
1,007,541 - 14183 mRNA_5815 0.70 -0.6
1,008,125 - -0.2
1,008,425 + -1.6
1,008,545 - -0.5
1,008,723 - -0.5
1,008,836 - -2.3
1,008,843 + 0.4