Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5775

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5774: 14142 - K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126, at 918001 to 918584 14142 mRNA_5775: 14143 - Hypothetical Protein, at 918877 to 919776 14143 mRNA_5776: 14144 - HMMPfam-Phosphatidylinositol-specific phospholipase C, X domain-PF00388,ProSiteProfiles-Phosphatidylinositol-specific phospholipase X-box domain profile.-PS50007,SUPERFAMILY--SSF51695, at 920137 to 921765 14144

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
917,901 - 0.3
918,071 - 14142 mRNA_5774 0.12 -1.1
918,359 + 14142 mRNA_5774 0.61 -0.2
918,521 + 14142 mRNA_5774 0.89 0.8
918,612 - -0.0
918,770 + -1.6
918,784 - 0.2
918,791 + 0.1
919,057 - 14143 mRNA_5775 0.20 0.2
919,209 - 14143 mRNA_5775 0.37 2.0
919,486 - 14143 mRNA_5775 0.68 -0.2
919,515 - 14143 mRNA_5775 0.71 0.1
919,646 - 14143 mRNA_5775 0.85 0.8
919,666 - 14143 mRNA_5775 0.88 1.2
919,726 - 0.4
919,767 - -1.0
919,951 + 0.6
919,973 - -1.4
919,973 - -0.1
919,988 - -0.9
919,997 + 0.2
919,998 - -0.2
920,004 + 0.6
920,013 + -0.9
920,030 + -0.8
920,043 - -1.0
920,069 + 0.0
920,131 + -0.3
920,315 + 14144 mRNA_5776 0.11 -0.0
920,407 - 14144 mRNA_5776 0.17 0.2
920,615 - 14144 mRNA_5776 0.29 -0.3
920,616 + 14144 mRNA_5776 0.29 0.4
920,637 + 14144 mRNA_5776 0.31 0.8