Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5750

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5749: 14117 - K14863 YTM1, WDR12 ribosome biogenesis protein YTM1, at 850865 to 852979 14117 mRNA_5750: 14118 - KOG2306 Uncharacterized conserved protein, at 853248 to 855227 14118 mRNA_5751: 14119 - K14708 SLC26A11 solute carrier family 26 (sodium-independent sulfate anion transporter), member 11, at 855663 to 858482 14119

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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853,064 + 0.1
853,075 + 0.6
853,083 - 0.2
853,100 + -0.1
853,372 - 0.7
853,374 + 0.8
853,384 + 0.8
853,499 + 14118 mRNA_5750 0.13 1.2
853,826 + 14118 mRNA_5750 0.29 0.3
853,827 - 14118 mRNA_5750 0.29 -0.2
853,976 - 14118 mRNA_5750 0.37 -0.5
854,240 - 14118 mRNA_5750 0.50 -0.7
854,280 + 14118 mRNA_5750 0.52 -0.3
854,573 + 14118 mRNA_5750 0.67 -0.2
854,934 + 14118 mRNA_5750 0.85 -1.0
854,986 - 14118 mRNA_5750 0.88 0.4
855,101 + 0.6
855,114 - -1.0
855,129 + 0.1
855,143 + -0.5
855,145 + -1.0
855,153 - 0.0
855,424 - -0.2
855,433 + -0.4
855,439 - -0.7
855,483 + 1.4
855,577 + -0.2
855,587 + -0.5
855,903 - 1.4
856,082 - 14119 mRNA_5751 0.15 0.2
856,129 - 14119 mRNA_5751 0.17 0.2