Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5731

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5731: 14099 - Hypothetical Protein, at 797618 to 798076 14099 mRNA_5732: 14100 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Minimal binding motif of Hap4 for binding to Hap2/3/5-PF10297,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959, at 798563 to 800717 14100

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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797,429 + -0.5
797,460 - -0.9
797,578 - -0.3
797,583 + -0.5
797,718 - 14099 mRNA_5731 0.22 0.5
797,721 + 14099 mRNA_5731 0.22 0.4
797,727 + 14099 mRNA_5731 0.24 0.4
797,740 - 14099 mRNA_5731 0.27 -0.2
797,747 + 14099 mRNA_5731 0.28 1.3
797,757 + 14099 mRNA_5731 0.30 -0.4
797,991 - 14099 mRNA_5731 0.81 -1.9
798,449 + 1.8
798,468 + 1.8
798,470 + 1.3
798,480 + -0.6
798,649 + -0.0
798,935 + 14100 mRNA_5732 0.17 0.1