Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5724

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5723: 14091 - K15447 TRM44, METTL19 tRNASer (uridine44-2'-O)-methyltransferase, at 774192 to 776044 14091 mRNA_5724: 14092 - K05310 GPI7 ethanolaminephosphotransferase, at 776159 to 779515 14092 mRNA_5725: 14093 - K03234 EEF2 elongation factor 2, at 779611 to 783273 14093

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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776,247 + -0.3
776,324 - 0.1
776,333 - 0.8
776,341 + 0.5
776,784 - 14092 mRNA_5724 0.19 0.2
777,002 + 14092 mRNA_5724 0.25 0.1
777,051 - 14092 mRNA_5724 0.27 -0.0
777,384 - 14092 mRNA_5724 0.36 -1.0
777,519 + 14092 mRNA_5724 0.41 0.4
777,523 - 14092 mRNA_5724 0.41 0.4
777,634 - 14092 mRNA_5724 0.44 -0.8
777,965 + 14092 mRNA_5724 0.54 0.3
778,103 - 14092 mRNA_5724 0.58 1.5
778,116 - 14092 mRNA_5724 0.58 -0.9
778,314 + 14092 mRNA_5724 0.64 0.2
778,390 - 14092 mRNA_5724 0.66 0.2
778,534 + 14092 mRNA_5724 0.71 -1.7
779,117 - 14092 mRNA_5724 0.88 0.6
779,125 + 14092 mRNA_5724 0.88 1.7
779,125 - 14092 mRNA_5724 0.88 -0.1
779,130 + 14092 mRNA_5724 0.89 1.6
779,288 + 0.4
779,296 + 0.1
779,298 - -0.3
779,443 + -0.6
779,571 + -1.3
779,621 + 0.5
779,624 - 1.5
779,627 + -1.3
779,630 - 0.0
779,630 - -0.9
779,635 + -2.0
779,636 - 0.8
779,639 + 1.6
779,640 - -0.7
779,658 - 1.0