Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5660

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5659: 14027 - KOG2422 Uncharacterized conserved protein, at 620797 to 623499 14027 mRNA_5660: 14028 - Hypothetical Protein, at 623646 to 625624 14028 mRNA_5661: 14029 - K15151 MED10, NUT2 mediator of RNA polymerase II transcription subunit 10, at 626154 to 626959 14029

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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622,867 + 14027 mRNA_5659 0.77 -1.2
622,957 - 14027 mRNA_5659 0.80 1.5
623,688 - 0.2
623,699 + -0.8
623,704 + -0.5
623,713 + -0.8
623,722 - -1.2
623,819 - -0.3
624,235 + 14028 mRNA_5660 0.30 -0.4
624,239 - 14028 mRNA_5660 0.30 0.9
624,358 - 14028 mRNA_5660 0.36 0.9
624,546 + 14028 mRNA_5660 0.45 1.3
624,709 - 14028 mRNA_5660 0.54 -0.8
625,550 - -0.8
625,581 - 0.6
625,694 - 0.0
625,710 + 0.8
625,990 + -0.8