Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5576

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5575: 13943 - K12873 BUD31, G10 bud site selection protein 31, at 414313 to 415303 13943 mRNA_5576: 13944 - Interpro GDP-fucose protein O-fucosyltransferase, at 415685 to 417537 13944 mRNA_5577: 13945 - Hypothetical Protein, at 418154 to 419235 13945

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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415,201 + 13943 mRNA_5575 0.90 1.4
415,459 + -0.0
415,470 + -0.6
415,495 - -1.5
415,510 - -0.0
415,634 - -0.7
415,648 - 1.1
415,649 + 0.0
415,664 + -0.5
415,956 - 13944 mRNA_5576 0.15 1.1
415,960 + 13944 mRNA_5576 0.15 -0.8
416,079 - 13944 mRNA_5576 0.21 2.0
416,219 - 13944 mRNA_5576 0.29 -0.3
416,253 + 13944 mRNA_5576 0.31 1.2
416,477 + 13944 mRNA_5576 0.43 0.9
416,814 + 13944 mRNA_5576 0.61 -0.9
416,938 - 13944 mRNA_5576 0.68 0.6
416,955 - 13944 mRNA_5576 0.69 0.3
417,566 - -0.1
417,972 - -1.5
418,407 - 13945 mRNA_5577 0.23 -0.3