Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5539

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5538: 13906 - Hypothetical Protein, at 327452 to 328556 13906 mRNA_5539: 13907 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 328856 to 330220 13907 mRNA_5540: 13908 - Interpro GDP-fucose protein O-fucosyltransferase, at 330944 to 333027 13908

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
327,904 - 13906 mRNA_5538 0.41 0.0
327,938 - 13906 mRNA_5538 0.44 -0.8
327,961 + 13906 mRNA_5538 0.46 -1.6
327,963 - 13906 mRNA_5538 0.46 -0.4
328,079 - 13906 mRNA_5538 0.57 -2.6
328,079 - 13906 mRNA_5538 0.57 0.4
328,138 - 13906 mRNA_5538 0.62 0.0
328,245 + 13906 mRNA_5538 0.72 -1.7
328,251 + 13906 mRNA_5538 0.72 -0.1
328,270 - 13906 mRNA_5538 0.74 -1.2
328,524 - 0.2
328,535 + 0.1
328,537 + -0.3
328,540 - -0.0
328,546 - -0.3
328,690 + 1.6
329,242 + 13907 mRNA_5539 0.28 -0.7
329,267 - 13907 mRNA_5539 0.30 0.1
329,597 - 13907 mRNA_5539 0.54 -0.3
329,604 - 13907 mRNA_5539 0.55 -0.3
329,708 - 13907 mRNA_5539 0.62 0.2
329,859 + 13907 mRNA_5539 0.73 -0.4
329,996 + 13907 mRNA_5539 0.84 -0.9
330,435 + -0.9
330,445 - -0.5
330,574 - -0.6
330,579 - -0.5
330,580 + -0.7
330,589 - -0.8
330,728 + -0.5
330,737 - -0.5
330,753 + -0.2
330,753 + -0.1
330,761 + 0.2
330,861 - 1.0
330,870 - 0.6
330,897 - 0.4
331,024 - -0.3