Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5534

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5533: 13901 - Hypothetical Protein, at 314025 to 315738 13901 mRNA_5534: 13902 - K18798 AFG1, LACE1 peroxisome-assembly ATPase, at 315936 to 317983 13902 mRNA_5535: 13903 - K15305 VAC14, TAX1BP2 vacuole morphology and inheritance protein 14, at 318348 to 322384 13903

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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315,832 + -0.3
315,836 + -0.5
315,843 + 0.5
315,973 - -2.0
316,083 - -0.4
316,107 + -1.2
316,119 - 0.5
316,121 + 0.4
316,550 + 13902 mRNA_5534 0.30 -0.3
316,830 + 13902 mRNA_5534 0.44 0.4
317,116 - 13902 mRNA_5534 0.58 0.8
317,237 - 13902 mRNA_5534 0.64 -0.1
317,258 + 13902 mRNA_5534 0.65 -0.9
317,302 + 13902 mRNA_5534 0.67 0.7
317,541 + 13902 mRNA_5534 0.78 -0.1
317,550 - 13902 mRNA_5534 0.79 0.3
317,558 + 13902 mRNA_5534 0.79 0.4
317,562 + 13902 mRNA_5534 0.79 0.7
317,699 + 13902 mRNA_5534 0.86 0.4
317,722 - 13902 mRNA_5534 0.87 -1.3
317,741 - 13902 mRNA_5534 0.88 0.8
317,855 + -1.7
318,012 + -0.1
318,028 - 0.2
318,029 + -1.2
318,033 + -0.1
318,042 + -0.2
318,046 + 0.5
318,173 - 0.3
318,304 - -2.4
318,310 + -0.8
318,313 + -0.3
318,313 + -1.3
318,562 + -0.9