Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5517

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280339 to 282741 13885

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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279,435 - 0.7
279,550 + 0.6
279,552 - -0.2
279,562 + 0.9
279,565 + 0.6
279,589 + 0.3
279,710 - -0.2
279,711 + 0.1
279,716 - 0.0
279,726 + -0.7
279,747 + -1.3
279,846 + -0.7
279,864 + 0.8
279,866 - 0.5
279,874 + -0.4
279,883 + -0.2
279,902 + 0.2
280,009 - -1.4
280,050 + -0.7
280,053 - 0.4
280,092 + 1.8
280,135 + 0.2
280,173 + 1.7
280,186 + -1.5
280,451 - 0.2
280,457 + 0.7
280,625 - 13885 mRNA_5517 0.12 -0.0
280,918 + 13885 mRNA_5517 0.24 0.4
281,056 + 13885 mRNA_5517 0.30 0.2
281,223 + 13885 mRNA_5517 0.37 -1.3
281,403 + 13885 mRNA_5517 0.44 1.7
281,474 - 13885 mRNA_5517 0.47 -0.2
281,813 + 13885 mRNA_5517 0.61 0.3
281,817 - 13885 mRNA_5517 0.62 -1.8
281,915 + 13885 mRNA_5517 0.66 -0.6
281,918 - 13885 mRNA_5517 0.66 0.4
282,084 - 13885 mRNA_5517 0.73 -0.2
282,441 + 13885 mRNA_5517 0.87 -0.2
282,669 - -0.3
282,949 + -0.5
283,108 - -0.3
283,138 + -0.0
283,404 - -0.2
283,426 - 0.2
283,532 - 0.4
283,544 - 0.2
283,571 + 0.8