Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5500

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240567 to 242106 13867 mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242489 to 245110 13868 mRNA_5501: 13869 - Hypothetical Protein, at 245382 to 247759 13869

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
242,007 + 0.2
242,009 + -0.8
242,120 + 0.4
242,144 - -0.1
242,160 + -1.0
242,181 - 0.5
242,193 + -0.1
242,467 - -2.2
242,470 + -0.5
242,483 - -0.1
242,719 + -0.1
242,736 + 0.2
242,760 - 13868 mRNA_5500 0.10 -0.9
242,800 - 13868 mRNA_5500 0.12 1.0
242,899 - 13868 mRNA_5500 0.16 0.2
243,050 + 13868 mRNA_5500 0.21 0.1
243,117 + 13868 mRNA_5500 0.24 -0.9
243,217 - 13868 mRNA_5500 0.28 0.6
243,477 + 13868 mRNA_5500 0.38 0.5
243,709 - 13868 mRNA_5500 0.47 0.3
243,837 + 13868 mRNA_5500 0.51 -0.2
243,841 - 13868 mRNA_5500 0.52 0.0
243,857 - 13868 mRNA_5500 0.52 -0.1
243,993 - 13868 mRNA_5500 0.57 0.8
244,300 + 13868 mRNA_5500 0.69 0.2
245,091 + 0.8
245,115 + -0.6
245,379 - 0.1
245,406 - 0.5
245,720 + 13869 mRNA_5501 0.14 -1.4