Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5482

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199332 to 200672 13849 mRNA_5482: 13850 - Hypothetical Protein, at 201045 to 202061 13850 mRNA_5483: 13851 - KOG1339 Aspartyl protease, at 202681 to 205111 13851

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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200,071 - 13849 mRNA_5481 0.55 -0.2
200,156 + 13849 mRNA_5481 0.61 -0.3
200,237 - 13849 mRNA_5481 0.67 -0.6
200,240 + 13849 mRNA_5481 0.68 2.4
200,559 - 2.0
200,770 + 0.1
201,004 - 0.4
201,244 + 13850 mRNA_5482 0.20 1.4
201,247 - 13850 mRNA_5482 0.20 -0.4
201,716 - 13850 mRNA_5482 0.66 -0.3
201,728 + 13850 mRNA_5482 0.67 -0.2
201,858 - 13850 mRNA_5482 0.80 -0.3
202,025 + -0.3
202,128 - -0.7
202,269 - 0.7
202,281 + -0.0
202,292 - -1.5
202,408 - -0.4
202,410 + -0.1
202,411 + -0.5
202,413 + 0.6
202,424 + -0.5
202,431 + 0.8
202,585 + -0.3
202,601 - 0.4
202,729 - -0.8
202,739 + -1.0
202,742 - -0.8
202,885 - 1.3
202,903 - -0.1
203,044 - 13851 mRNA_5483 0.15 0.2
203,057 + 13851 mRNA_5483 0.15 -0.7