Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5477

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183800 to 188314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188584 to 192714 13845 mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192866 to 194409 13846

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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188,366 + -1.0
188,373 + 0.1
188,390 - 0.0
188,512 - -0.1
188,521 + -0.4
188,794 - -0.5
189,613 - 13845 mRNA_5477 0.25 -0.5
190,270 - 13845 mRNA_5477 0.41 0.0
192,339 + -1.3
192,752 - -1.4
192,792 - -0.7
192,795 - -0.2
192,796 + -0.4
192,800 + -0.1
192,816 - 0.6
192,822 + 0.8
192,823 + 0.3
192,957 - -0.4
192,962 + -2.4