Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5454

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5453: 13821 - HMMPfam-Glutaredoxin-like domain (DUF836)-PF05768,SUPERFAMILY--SSF52833, at 126542 to 126978 13821 mRNA_5454: 13822 - KOG2673 Uncharacterized conserved protein, contains PSP domain, at 127145 to 127753 13822 mRNA_5455: 13823 - PRINTS-Proline rich extensin signature-PR01217, at 127817 to 128320 13823

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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126,316 - -1.2
126,486 + 0.5
126,766 + 13821 mRNA_5453 0.51 0.5
127,034 + -0.8
127,066 + 0.3
127,488 + 13822 mRNA_5454 0.56 -1.3
127,784 + -1.0
128,340 - -0.2
128,478 + 0.1
128,507 - 0.5
128,517 + -0.8
128,533 + 0.9
128,553 + -0.3
128,612 - 3.0
128,622 + -0.5
128,625 + 0.4
128,629 + -1.1
128,635 - -1.0
128,640 - -1.0
128,666 + 0.4
128,681 - 0.9
128,682 - -0.2
128,696 - -0.7
128,709 - -0.7
128,716 - -1.7
128,717 + 1.3
128,732 - 0.2