Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5404

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5403: 13771 - K00789 metK S-adenosylmethionine synthetase, at 18980 to 21610 13771 mRNA_5404: 13772 - Hypothetical Protein, at 22508 to 23850 13772 mRNA_5405: 13773 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 23970 to 26723 13773

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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21,727 - -0.3
21,866 + -0.3
21,993 + -0.3
22,296 - -0.2
22,405 + -0.1
22,461 + -2.2
22,499 + 1.1
22,578 + -0.9
22,593 - -0.3
22,602 + -1.5
22,631 + -1.8
22,695 + 13772 mRNA_5404 0.14 -0.4
22,756 + 13772 mRNA_5404 0.18 -0.3
22,764 - 13772 mRNA_5404 0.19 0.1
22,872 - 13772 mRNA_5404 0.27 0.5
22,887 + 13772 mRNA_5404 0.28 -0.2
22,895 + 13772 mRNA_5404 0.29 1.0
22,896 + 13772 mRNA_5404 0.29 0.6
22,955 + 13772 mRNA_5404 0.33 0.2
23,068 - 13772 mRNA_5404 0.42 -0.4
23,070 + 13772 mRNA_5404 0.42 -0.4
23,070 - 13772 mRNA_5404 0.42 -0.3
23,095 + 13772 mRNA_5404 0.44 0.0
23,279 + 13772 mRNA_5404 0.57 -1.0
23,283 + 13772 mRNA_5404 0.58 0.0
23,330 - 13772 mRNA_5404 0.61 -0.2
23,359 - 13772 mRNA_5404 0.63 1.2
23,432 - 13772 mRNA_5404 0.69 -1.2
23,641 + 13772 mRNA_5404 0.84 -0.4
23,774 - -0.2
23,900 - -0.1
23,908 - -0.3
23,929 + -0.2
23,967 + -1.4
24,070 - 0.8
24,078 - 1.5
24,081 + -0.8
24,518 + 13773 mRNA_5405 0.20 0.1
24,766 - 13773 mRNA_5405 0.29 0.4
24,827 - 13773 mRNA_5405 0.31 -0.6
24,850 - 13773 mRNA_5405 0.32 0.1