Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5362

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5361: 13729 - K00511 SQLE, ERG1 squalene monooxygenase, at 541060 to 542859 13729 mRNA_5362: 13730 - Hypothetical Protein, at 543125 to 544034 13730 mRNA_5363: 13731 - KOG0254 Predicted transporter (major facilitator superfamily), at 544330 to 546394 13731

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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543,014 - 0.3
543,056 + -0.2
543,061 - 0.1
543,069 + 0.9
543,083 - -1.3
543,094 + -1.0
543,117 - -1.1
543,129 + 0.6
543,166 - 0.1
543,193 - 0.1
543,194 + -0.2
543,282 + 13730 mRNA_5362 0.17 -0.7
543,318 + 13730 mRNA_5362 0.21 -0.1
543,418 - 13730 mRNA_5362 0.32 0.3
543,625 - 13730 mRNA_5362 0.55 0.2
543,783 - 13730 mRNA_5362 0.72 -1.0
543,816 + 13730 mRNA_5362 0.76 0.4
543,931 + 13730 mRNA_5362 0.89 0.0
543,931 + 13730 mRNA_5362 0.89 -0.1
543,951 - -0.9
543,959 - 0.1
543,959 + -0.1
543,970 - -0.8
544,005 - 1.1
544,007 - 0.3
544,029 - -0.3
544,035 + -1.3
544,084 - -1.7
544,109 + -0.6
544,418 - 0.8
544,761 + 13731 mRNA_5363 0.21 -0.0