Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5347

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5346: 13714 - HMMPfam-Hamartin protein-PF04388, at 504794 to 508994 13714 mRNA_5347: 13715 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 509884 to 511420 13715

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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508,937 + -0.7
509,071 - 0.6
509,236 - -0.2
509,251 - 1.3
509,387 - -0.2
509,395 - 0.0
509,526 + -0.2
509,529 + 1.3
509,680 + -0.8
509,704 + -0.1
509,820 - -0.1
509,826 + -0.0
509,989 - 0.2
510,002 - -2.9
510,128 + 13715 mRNA_5347 0.16 1.2
510,298 - 13715 mRNA_5347 0.27 2.3
510,433 + 13715 mRNA_5347 0.36 -0.7
510,554 + 13715 mRNA_5347 0.44 -0.6
510,571 - 13715 mRNA_5347 0.45 -1.4
510,716 + 13715 mRNA_5347 0.54 -0.2
510,870 - 13715 mRNA_5347 0.64 -0.1
510,893 - 13715 mRNA_5347 0.66 -0.1
511,040 - 13715 mRNA_5347 0.75 1.5
511,442 - -0.3
511,465 - 0.8
511,628 - 0.2
511,643 + 0.4
511,906 - 1.0
511,914 + -1.0
512,063 + -0.4
512,192 - -0.6
512,359 - -0.5