Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5335

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5334: 13702 - K14563 NOP1, FBL rRNA 2'-O-methyltransferase fibrillarin, at 479497 to 481330 13702 mRNA_5335: 13703 - HMMPfam-Domain of unknown function (DUF4202)-PF13875, at 481630 to 482657 13703 mRNA_5336: 13704 - K14777 DDX47, RRP3 ATP-dependent RNA helicase DDX47/RRP3, at 482937 to 484688 13704

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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481,414 + 0.2
481,462 + -0.4
481,532 - -0.3
481,540 + 0.1
481,564 + 0.1
481,703 + 0.6
481,703 + -0.4
481,742 - 13703 mRNA_5335 0.11 -0.9
481,955 + 13703 mRNA_5335 0.32 -1.5
482,031 - 13703 mRNA_5335 0.39 -0.8
482,554 + 13703 mRNA_5335 0.90 1.0
482,558 - 0.9
482,590 - -0.3
482,818 - 0.3
482,833 - -0.4
482,867 - -0.3