Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5317

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5316: 13684 - Hypothetical Protein, at 440018 to 441628 13684 mRNA_5317: 13685 - K17498 SPN1, IWS1 transcription factor SPN1, at 441871 to 444778 13685 mRNA_5318: 13686 - KOG4315 G-patch nucleic acid binding protein, at 444861 to 446150 13686

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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441,095 - 13684 mRNA_5316 0.67 -0.2
441,107 + 13684 mRNA_5316 0.68 -1.0
441,203 - 13684 mRNA_5316 0.74 -1.2
441,234 - 13684 mRNA_5316 0.75 0.4
441,321 - 13684 mRNA_5316 0.81 0.2
441,429 + 13684 mRNA_5316 0.88 -0.8
441,548 - 1.2
441,551 + -0.0
441,554 - 0.3
441,750 + 0.1
441,967 + 0.3
442,128 + -1.1
442,146 + -0.6
442,289 - 13685 mRNA_5317 0.14 -0.3
442,296 - 13685 mRNA_5317 0.15 1.9
442,578 - 13685 mRNA_5317 0.24 -0.4
442,618 + 13685 mRNA_5317 0.26 -0.3
442,734 + 13685 mRNA_5317 0.30 -0.2
442,748 - 13685 mRNA_5317 0.30 1.6
442,750 + 13685 mRNA_5317 0.30 -0.7
442,751 - 13685 mRNA_5317 0.30 -0.4
442,757 + 13685 mRNA_5317 0.30 -0.9
442,871 - 13685 mRNA_5317 0.34 -0.0
443,150 - 13685 mRNA_5317 0.44 -1.1
443,152 - 13685 mRNA_5317 0.44 0.2
443,211 + 13685 mRNA_5317 0.46 -0.7
444,765 - 1.0
445,052 - 13686 mRNA_5318 0.15 1.6