Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5311

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5310: 13678 - Hypothetical Protein, at 425565 to 427309 13678 mRNA_5311: 13679 - Hypothetical Protein, at 427613 to 428578 13679 mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429063 to 429953 13680

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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426,640 + 13678 mRNA_5310 0.62 -0.8
426,642 - 13678 mRNA_5310 0.62 1.1
426,709 + 13678 mRNA_5310 0.66 0.9
427,160 + -0.1
427,240 - -0.5
427,241 + -0.5
427,261 + 0.2
427,314 - -0.2
427,323 - -0.3
427,361 - 0.0
427,364 - -0.5
427,388 - 1.3
427,472 + -0.2
427,487 - -2.1
427,513 + 0.9
427,529 - -0.9
427,548 + -1.5
427,587 - -0.3
427,604 + 0.0
427,620 - -0.2
427,628 - -0.3
427,665 - 0.9
427,667 + -3.3
427,671 + -0.2
427,710 + 13679 mRNA_5311 0.10 0.7
427,744 + 13679 mRNA_5311 0.14 -0.1
427,843 + 13679 mRNA_5311 0.24 -0.4
428,068 - 13679 mRNA_5311 0.47 0.3
428,075 + 13679 mRNA_5311 0.48 1.7
428,106 - 13679 mRNA_5311 0.51 -0.5
428,203 + 13679 mRNA_5311 0.61 -0.8
428,218 - 13679 mRNA_5311 0.63 -0.1
428,251 - 13679 mRNA_5311 0.66 -1.1
428,453 + 13679 mRNA_5311 0.87 1.1
428,468 - 13679 mRNA_5311 0.89 -0.7
428,487 + 1.5
428,635 + 0.3
428,650 + 0.4
428,654 - 0.7
428,664 + -0.3
428,671 - -0.5
428,705 + -0.1
428,720 - -0.6
428,778 - -0.3
428,779 + 0.7
428,781 + -1.6
428,783 + -0.7
428,785 + -0.4
428,787 - -0.9
428,797 - 0.0
428,799 + -0.1
428,800 - -0.0
428,802 - 0.3
428,818 - 1.1
428,819 - 0.4
428,824 - 1.3
428,825 + -0.5
428,827 + -0.1
428,829 + 0.3
428,830 - 0.3
428,836 - -1.9
428,837 + -0.1
428,846 - -0.8
428,898 + -0.5
428,973 + -1.1
429,021 - -0.2