Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5309

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5308: 13676 - Hypothetical Protein, at 421969 to 422926 13676 mRNA_5309: 13677 - KOG0628 Aromatic-L-amino-acid/L-histidine decarboxylase, at 423149 to 425154 13677 mRNA_5310: 13678 - Hypothetical Protein, at 425565 to 427309 13678

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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422,240 + 13676 mRNA_5308 0.28 -1.2
422,242 + 13676 mRNA_5308 0.28 -0.1
422,275 + 13676 mRNA_5308 0.32 -0.1
422,520 + 13676 mRNA_5308 0.58 0.5
422,761 - 13676 mRNA_5308 0.83 0.2
423,117 + -0.1
423,285 + 0.1
423,411 - 13677 mRNA_5309 0.13 0.8
423,648 + 13677 mRNA_5309 0.25 0.6
423,669 + 13677 mRNA_5309 0.26 -1.0
423,878 - 13677 mRNA_5309 0.36 0.2
424,308 - 13677 mRNA_5309 0.58 0.7
424,309 + 13677 mRNA_5309 0.58 0.7
424,429 + 13677 mRNA_5309 0.64 -1.8
424,432 - 13677 mRNA_5309 0.64 -0.5
424,583 + 13677 mRNA_5309 0.71 -0.4
424,906 - 13677 mRNA_5309 0.88 -0.2
425,007 + -0.2
425,019 + -0.6
425,024 - -0.3
425,028 + 1.6
425,144 - 1.6
425,147 - 0.5
425,300 - -0.6
425,308 - 0.1
425,312 - 0.2
425,312 - 0.1
425,314 - -1.4
425,323 - 0.0
425,324 + 0.1
425,328 + -1.4
425,328 + 0.3
425,328 + 0.4
425,338 - -1.9
425,341 + -0.7
425,341 - 0.7
425,352 - -1.6
425,468 + 1.0
425,475 + -2.0
425,477 + -0.2
425,484 + 0.7
425,486 + -0.3
425,498 + -0.6
425,498 + -0.9
425,502 + 0.1
425,620 + -1.7
425,640 + -0.5
425,642 + 1.1
425,648 - 0.3
425,902 + 13678 mRNA_5310 0.19 0.0
425,939 + 13678 mRNA_5310 0.21 1.2
426,061 + 13678 mRNA_5310 0.28 0.4