Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5210

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5209: 13577 - K03257 EIF4A translation initiation factor 4A, at 153381 to 155810 13577 mRNA_5210: 13578 - KOG3221 Glycolipid transfer protein, at 156736 to 157976 13578 mRNA_5211: 13579 - BLAST related to UPF0768 protein YBL029C-A [Zygosaccharomyc..., at 158362 to 159031 13579

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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155,951 + -0.7
156,241 - -1.1
156,242 - -2.8
156,374 - -0.4
156,390 + -0.2
156,400 - -0.5
156,638 - -0.5
156,659 - -3.1
156,674 + -0.2
156,682 + -0.3
156,684 - -0.4
156,684 + -0.2
156,689 + -1.5
156,692 - 0.4
156,800 - -0.4
156,823 - -0.6
156,851 - -0.4
156,856 + -0.2
156,858 - 0.7
156,868 + 13578 mRNA_5210 0.11 -0.3
156,991 - 13578 mRNA_5210 0.21 1.2
156,992 - 13578 mRNA_5210 0.21 -1.1
157,014 - 13578 mRNA_5210 0.22 0.0
157,279 - 13578 mRNA_5210 0.44 0.9
158,164 + 0.1
158,168 + -0.6
158,282 + 0.6
158,300 + 0.6
158,329 + 1.0
158,446 + 13579 mRNA_5211 0.13 -0.1
158,622 - 13579 mRNA_5211 0.39 0.1
158,736 - 13579 mRNA_5211 0.56 0.4
158,760 + 13579 mRNA_5211 0.59 0.6