Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5163

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5163: 13531 - Hypothetical Protein, at 48190 to 49744 13531 mRNA_5164: 13532 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 50171 to 51821 13532

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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47,502 - -1.3
47,571 + -0.9
47,646 - -0.9
47,740 - -0.6
47,789 - 0.0
47,798 - 0.1
47,911 - 1.4
47,944 + 0.1
47,985 - -1.1
48,125 + 0.3
48,152 - -1.2
48,342 - 0.2
48,385 + 13531 mRNA_5163 0.13 0.3
48,388 - 13531 mRNA_5163 0.13 1.0
48,454 + 13531 mRNA_5163 0.17 -0.8
48,559 - 13531 mRNA_5163 0.24 -1.8
48,577 + 13531 mRNA_5163 0.25 -0.8
48,580 + 13531 mRNA_5163 0.25 0.6
48,580 + 13531 mRNA_5163 0.25 -0.6
48,746 - 13531 mRNA_5163 0.36 -0.3
49,019 - 13531 mRNA_5163 0.53 -0.1
49,265 + 13531 mRNA_5163 0.69 -1.0
49,292 - 13531 mRNA_5163 0.71 2.4
49,324 + 13531 mRNA_5163 0.73 0.6
49,385 + 13531 mRNA_5163 0.77 0.6
49,489 + 13531 mRNA_5163 0.84 -0.7
49,627 + 0.3
49,710 + -1.1
49,776 - 0.9
49,793 + -1.8
50,191 - 0.8
50,200 + 0.6
50,607 - 13532 mRNA_5164 0.26 0.8
50,732 - 13532 mRNA_5164 0.34 -1.6