Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5125

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5124: 13492 - K13248 PHOSPHO2 pyridoxal phosphate phosphatase PHOSPHO2, at 1816992 to 1818246 13492 mRNA_5125: 13493 - Interpro Protein of unknown function (DUF3431), at 1818424 to 1820541 13493 mRNA_5126: 13494 - Hypothetical Protein, at 1820665 to 1821231 13494 mRNA_5127: 13495 - K07941 ARF6 ADP-ribosylation factor 6, at 1821519 to 1822822 13495

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,818,297 + -0.8
1,818,305 + -0.4
1,818,381 - 1.2
1,818,785 + 13493 mRNA_5125 0.17 -0.7
1,819,881 + 13493 mRNA_5125 0.69 -2.5
1,819,900 + 13493 mRNA_5125 0.70 -1.4
1,819,995 - 13493 mRNA_5125 0.74 -0.3
1,820,213 + 13493 mRNA_5125 0.84 1.0
1,820,854 - 13494 mRNA_5126 0.33 0.8
1,820,855 - 13494 mRNA_5126 0.34 -1.2
1,820,857 - 13494 mRNA_5126 0.34 -1.2
1,820,867 - 13494 mRNA_5126 0.36 -1.2
1,820,962 - 13494 mRNA_5126 0.52 2.0
1,821,010 + 13494 mRNA_5126 0.61 -0.8
1,821,052 + 13494 mRNA_5126 0.68 0.3
1,821,441 + -0.6