Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5100

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5099: 13467 - Hypothetical Protein, at 1749217 to 1750028 13467 mRNA_5100: 13468 - Hypothetical Protein, at 1750173 to 1750911 13468 mRNA_5101: 13469 - K12669 OST3, OST6 oligosaccharyltransferase complex subunit gamma, at 1751358 to 1752700 13469

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,749,271 + 0.0
1,749,440 + 13467 mRNA_5099 0.27 -0.2
1,749,594 + 13467 mRNA_5099 0.46 -0.1
1,749,596 - 13467 mRNA_5099 0.47 -0.2
1,749,610 + 13467 mRNA_5099 0.48 -0.4
1,749,617 + 13467 mRNA_5099 0.49 -0.2
1,749,688 - 13467 mRNA_5099 0.58 -0.1
1,749,851 - 13467 mRNA_5099 0.78 0.2
1,749,863 + 13467 mRNA_5099 0.80 0.2
1,749,883 - 13467 mRNA_5099 0.82 -0.1
1,750,163 + 0.2
1,750,257 - 13468 mRNA_5100 0.11 0.9
1,750,435 + 13468 mRNA_5100 0.35 1.0
1,750,517 + 13468 mRNA_5100 0.47 0.4
1,750,570 + 13468 mRNA_5100 0.54 -0.3
1,750,627 - 13468 mRNA_5100 0.61 -0.0
1,750,703 + 13468 mRNA_5100 0.72 -0.9
1,750,796 - 13468 mRNA_5100 0.84 -1.6
1,750,919 - -0.8
1,750,941 - 0.2
1,750,963 - 1.2
1,751,000 + 0.1
1,751,001 + -0.7
1,751,002 - -0.3
1,751,003 + -0.4
1,751,003 + -1.1
1,751,004 - 0.4
1,751,029 + -0.0
1,751,048 + 0.4
1,751,084 - -1.5
1,751,088 + 1.4
1,751,127 - 0.8
1,751,128 + -0.4
1,751,134 - 0.4
1,751,139 - 0.9
1,751,173 + -1.2
1,751,218 + -0.6
1,751,285 + -0.1
1,751,299 - -0.9
1,751,312 - -0.1
1,751,316 + 1.1
1,751,335 + -0.5
1,751,343 + 0.7
1,751,343 + 0.2
1,751,636 - 13469 mRNA_5101 0.21 0.0
1,751,785 - 13469 mRNA_5101 0.32 -1.2