Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5085

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5084: 13452 - Hypothetical Protein, at 1712081 to 1713113 13452 mRNA_5085: 13453 - K03114 SWE1 mitosis inhibitor protein kinase SWE1, at 1713575 to 1718453 13453 mRNA_5086: 13454 - Hypothetical Protein, at 1718899 to 1719393 13454

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,712,581 + 13452 mRNA_5084 0.48 -0.2
1,712,714 + 13452 mRNA_5084 0.61 -0.2
1,712,720 + 13452 mRNA_5084 0.62 1.1
1,712,878 + 13452 mRNA_5084 0.77 -0.8
1,713,015 - -0.3
1,713,164 + -1.8
1,713,170 - -0.1
1,713,178 + -0.1
1,713,182 - -0.8
1,713,185 + -0.0
1,713,375 - -0.4
1,714,747 - 13453 mRNA_5085 0.24 -0.5
1,716,151 + 13453 mRNA_5085 0.53 1.4
1,716,413 - 13453 mRNA_5085 0.58 -0.4
1,716,989 - 13453 mRNA_5085 0.70 0.7
1,717,549 - 13453 mRNA_5085 0.81 0.2
1,718,124 - -0.6
1,718,132 + -1.3
1,718,133 - -1.0
1,718,273 - -0.0
1,718,601 + -0.3
1,718,744 + 0.9
1,718,755 - -0.0
1,718,763 + -1.5
1,718,763 + -1.0
1,718,773 + 1.3
1,718,787 + 0.2
1,718,808 + 0.6
1,718,828 + -0.5
1,718,941 + 0.8
1,719,043 - 13454 mRNA_5086 0.29 0.1