Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5080

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5079: 13447 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 1698116 to 1699686 13447 mRNA_5080: 13448 - K12486 SMAP stromal membrane-associated protein, at 1699891 to 1701497 13448 mRNA_5081: 13449 - K10396 KIF5 kinesin family member 5, at 1701702 to 1705465 13449

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,699,265 + 13447 mRNA_5079 0.73 -0.5
1,699,415 + 13447 mRNA_5079 0.83 0.2
1,699,421 - 13447 mRNA_5079 0.83 1.4
1,699,556 - 2.5
1,699,561 - -0.5
1,699,565 - 0.1
1,699,581 - 1.8
1,699,712 + -0.6
1,699,716 + 0.5
1,699,734 + -0.4
1,699,736 - -0.5
1,700,001 + -0.6
1,700,147 + 13448 mRNA_5080 0.16 -1.5
1,700,282 - 13448 mRNA_5080 0.24 -1.0
1,700,301 - 13448 mRNA_5080 0.26 0.0
1,700,317 + 13448 mRNA_5080 0.27 -0.9
1,700,944 - 13448 mRNA_5080 0.66 -2.2
1,701,461 - 0.5
1,701,716 - -0.1
1,701,765 - 0.6