Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5069

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5068: 13436 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 1673018 to 1675437 13436 mRNA_5069: 13437 - KOG2317 Putative translation initiation inhibitor UK114/IBM1, at 1676038 to 1676601 13437 mRNA_5070: 13438 - KOG3346 Phosphatidylethanolamine binding protein, at 1676835 to 1677879 13438

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,675,190 - 13436 mRNA_5068 0.90 -1.0
1,675,206 + -0.8
1,675,224 + -0.1
1,675,367 - 0.2
1,675,492 + 0.2
1,675,644 + 0.8
1,675,657 + -0.6
1,675,661 + 0.2
1,675,670 + -0.3
1,675,671 + 0.8
1,675,673 + -0.1
1,675,677 - -1.4
1,675,684 - -2.1
1,675,804 + -0.6
1,675,950 - -0.6
1,675,972 + -0.7
1,675,979 - -0.8
1,676,393 + 13437 mRNA_5069 0.63 -0.1
1,676,395 - 13437 mRNA_5069 0.63 -0.9
1,676,629 - -0.0
1,676,678 + 0.1
1,676,914 - -1.4
1,677,075 - 13438 mRNA_5070 0.23 -0.9
1,677,089 - 13438 mRNA_5070 0.24 -0.4